Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopeO89079 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CopeO89079 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CopeO89079 Gm26833-201ENSMUST00000180899 440 ntBASIC18.8■□□□□ 0.6
CopeO89079 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CopeO89079 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.8■□□□□ 0.6
CopeO89079 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopeO89079 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopeO89079 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CopeO89079 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopeO89079 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.79■□□□□ 0.6
CopeO89079 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.79■□□□□ 0.6
CopeO89079 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.79■□□□□ 0.6
CopeO89079 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopeO89079 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CopeO89079 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.79■□□□□ 0.6
CopeO89079 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopeO89079 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopeO89079 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopeO89079 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CopeO89079 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopeO89079 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CopeO89079 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopeO89079 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CopeO89079 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopeO89079 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopeO89079 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.78■□□□□ 0.6
CopeO89079 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopeO89079 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CopeO89079 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopeO89079 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CopeO89079 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopeO89079 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopeO89079 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.78■□□□□ 0.6
CopeO89079 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CopeO89079 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CopeO89079 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CopeO89079 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CopeO89079 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CopeO89079 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.77■□□□□ 0.6
CopeO89079 Gm12821-201ENSMUST00000120022 600 ntBASIC18.77■□□□□ 0.6
CopeO89079 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CopeO89079 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.77■□□□□ 0.6
CopeO89079 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.77■□□□□ 0.6
CopeO89079 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.77■□□□□ 0.6
CopeO89079 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CopeO89079 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CopeO89079 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CopeO89079 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CopeO89079 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CopeO89079 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CopeO89079 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopeO89079 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.76■□□□□ 0.59
CopeO89079 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopeO89079 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CopeO89079 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopeO89079 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopeO89079 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CopeO89079 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.76■□□□□ 0.59
CopeO89079 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.76■□□□□ 0.59
CopeO89079 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopeO89079 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopeO89079 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopeO89079 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopeO89079 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CopeO89079 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CopeO89079 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.75■□□□□ 0.59
CopeO89079 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.75■□□□□ 0.59
CopeO89079 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CopeO89079 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.75■□□□□ 0.59
CopeO89079 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CopeO89079 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CopeO89079 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CopeO89079 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms