Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.86□□□□□ -0.35
Sh2d1aO88890 Gm13234-201ENSMUST00000120010 747 ntBASIC12.86□□□□□ -0.35
Sh2d1aO88890 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.86□□□□□ -0.35
Sh2d1aO88890 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.86□□□□□ -0.35
Sh2d1aO88890 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.86□□□□□ -0.35
Sh2d1aO88890 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d1aO88890 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.85□□□□□ -0.35
Sh2d1aO88890 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Sh2d1aO88890 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d1aO88890 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh2d1aO88890 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sh2d1aO88890 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sh2d1aO88890 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Sh2d1aO88890 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sh2d1aO88890 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d1aO88890 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d1aO88890 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d1aO88890 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d1aO88890 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d1aO88890 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d1aO88890 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d1aO88890 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d1aO88890 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Sh2d1aO88890 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d1aO88890 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d1aO88890 Gm10493-201ENSMUST00000097270 612 ntBASIC12.83□□□□□ -0.36
Sh2d1aO88890 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh2d1aO88890 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms