Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Best1O88870 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Best1O88870 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Best1O88870 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.51■□□□□ 0.39
Best1O88870 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Best1O88870 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Best1O88870 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Best1O88870 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Best1O88870 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Best1O88870 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.51■□□□□ 0.39
Best1O88870 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.5■□□□□ 0.39
Best1O88870 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Best1O88870 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Best1O88870 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Best1O88870 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Best1O88870 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Best1O88870 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Best1O88870 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
Best1O88870 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Best1O88870 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Best1O88870 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Best1O88870 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Best1O88870 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Best1O88870 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Best1O88870 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Best1O88870 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Best1O88870 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Best1O88870 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Best1O88870 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Best1O88870 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Best1O88870 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Best1O88870 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.49■□□□□ 0.39
Best1O88870 Mir2861-201ENSMUST00000175539 82 ntBASIC17.49■□□□□ 0.39
Best1O88870 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Best1O88870 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Best1O88870 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Best1O88870 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.49■□□□□ 0.39
Best1O88870 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Best1O88870 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Best1O88870 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Best1O88870 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Best1O88870 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Best1O88870 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Best1O88870 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Best1O88870 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Best1O88870 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Best1O88870 Gm43183-201ENSMUST00000200632 547 ntBASIC17.48■□□□□ 0.39
Best1O88870 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Best1O88870 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Best1O88870 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Best1O88870 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
Best1O88870 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.47■□□□□ 0.39
Best1O88870 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.47■□□□□ 0.39
Best1O88870 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.47■□□□□ 0.39
Best1O88870 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.47■□□□□ 0.39
Best1O88870 Gm42545-201ENSMUST00000202755 922 ntBASIC17.47■□□□□ 0.39
Best1O88870 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Best1O88870 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.47■□□□□ 0.39
Best1O88870 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Best1O88870 Tgds-204ENSMUST00000228543 1594 ntBASIC17.46■□□□□ 0.39
Best1O88870 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Best1O88870 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.46■□□□□ 0.39
Best1O88870 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.46■□□□□ 0.39
Best1O88870 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Best1O88870 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Best1O88870 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Best1O88870 Gm37292-201ENSMUST00000192062 758 ntBASIC17.46■□□□□ 0.39
Best1O88870 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Best1O88870 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Best1O88870 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Best1O88870 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Best1O88870 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Best1O88870 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Best1O88870 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Best1O88870 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.45■□□□□ 0.38
Best1O88870 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Best1O88870 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Best1O88870 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Best1O88870 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Best1O88870 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.45■□□□□ 0.38
Best1O88870 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.45■□□□□ 0.38
Best1O88870 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Best1O88870 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.45■□□□□ 0.38
Best1O88870 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Best1O88870 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.45■□□□□ 0.38
Best1O88870 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.45■□□□□ 0.38
Best1O88870 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Best1O88870 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms