Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.68■□□□□ 0.42
ClppO88696 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.68■□□□□ 0.42
ClppO88696 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
ClppO88696 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ClppO88696 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ClppO88696 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClppO88696 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.67■□□□□ 0.42
ClppO88696 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ClppO88696 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.67■□□□□ 0.42
ClppO88696 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.67■□□□□ 0.42
ClppO88696 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.67■□□□□ 0.42
ClppO88696 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ClppO88696 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ClppO88696 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClppO88696 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ClppO88696 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.66■□□□□ 0.42
ClppO88696 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.66■□□□□ 0.42
ClppO88696 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ClppO88696 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ClppO88696 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ClppO88696 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClppO88696 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClppO88696 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClppO88696 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClppO88696 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ClppO88696 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ClppO88696 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ClppO88696 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ClppO88696 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ClppO88696 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClppO88696 Gm2559-201ENSMUST00000201323 363 ntBASIC17.65■□□□□ 0.42
ClppO88696 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.65■□□□□ 0.42
ClppO88696 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClppO88696 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClppO88696 Gm10812-201ENSMUST00000099864 546 ntBASIC17.65■□□□□ 0.42
ClppO88696 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.65■□□□□ 0.42
ClppO88696 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClppO88696 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
ClppO88696 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ClppO88696 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.64■□□□□ 0.42
ClppO88696 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ClppO88696 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClppO88696 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClppO88696 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClppO88696 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClppO88696 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClppO88696 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.64■□□□□ 0.41
ClppO88696 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.64■□□□□ 0.41
ClppO88696 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.64■□□□□ 0.41
ClppO88696 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClppO88696 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.64■□□□□ 0.41
ClppO88696 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClppO88696 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ClppO88696 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClppO88696 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ClppO88696 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClppO88696 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClppO88696 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ClppO88696 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClppO88696 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.63■□□□□ 0.41
ClppO88696 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClppO88696 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.63■□□□□ 0.41
ClppO88696 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClppO88696 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.63■□□□□ 0.41
ClppO88696 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClppO88696 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ClppO88696 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClppO88696 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ClppO88696 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms