Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.2■□□□□ 0.18
Slc28a2O88627 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Slc28a2O88627 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Slc28a2O88627 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.19■□□□□ 0.18
Slc28a2O88627 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.19■□□□□ 0.18
Slc28a2O88627 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc28a2O88627 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Slc28a2O88627 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc28a2O88627 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc28a2O88627 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc28a2O88627 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Slc28a2O88627 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Slc28a2O88627 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc28a2O88627 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc28a2O88627 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.18■□□□□ 0.18
Slc28a2O88627 Gm9988-201ENSMUST00000069786 435 ntBASIC16.18■□□□□ 0.18
Slc28a2O88627 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc28a2O88627 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc28a2O88627 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc28a2O88627 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Slc28a2O88627 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc28a2O88627 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc28a2O88627 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc28a2O88627 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc28a2O88627 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.17■□□□□ 0.18
Slc28a2O88627 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Slc28a2O88627 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.17■□□□□ 0.18
Slc28a2O88627 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Slc28a2O88627 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc28a2O88627 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Slc28a2O88627 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Slc28a2O88627 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Slc28a2O88627 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc28a2O88627 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Slc28a2O88627 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc28a2O88627 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc28a2O88627 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc28a2O88627 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Slc28a2O88627 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.16■□□□□ 0.18
Slc28a2O88627 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc28a2O88627 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc28a2O88627 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc28a2O88627 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc28a2O88627 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Slc28a2O88627 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc28a2O88627 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Slc28a2O88627 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc28a2O88627 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Slc28a2O88627 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc28a2O88627 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc28a2O88627 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc28a2O88627 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc28a2O88627 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc28a2O88627 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Slc28a2O88627 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc28a2O88627 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Slc28a2O88627 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Slc28a2O88627 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.15■□□□□ 0.18
Slc28a2O88627 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc28a2O88627 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc28a2O88627 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc28a2O88627 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc28a2O88627 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.14■□□□□ 0.17
Slc28a2O88627 Gm38205-201ENSMUST00000192243 258 ntBASIC16.14■□□□□ 0.17
Slc28a2O88627 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Slc28a2O88627 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc28a2O88627 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.14■□□□□ 0.17
Slc28a2O88627 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc28a2O88627 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc28a2O88627 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms