Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.81■□□□□ 0.92
Becn1O88597 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Becn1O88597 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.81■□□□□ 0.92
Becn1O88597 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.81■□□□□ 0.92
Becn1O88597 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Becn1O88597 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Becn1O88597 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Becn1O88597 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Becn1O88597 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Becn1O88597 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Becn1O88597 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Becn1O88597 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Becn1O88597 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Becn1O88597 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.8■□□□□ 0.92
Becn1O88597 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Becn1O88597 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Becn1O88597 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Becn1O88597 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Becn1O88597 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Becn1O88597 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Becn1O88597 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Becn1O88597 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Becn1O88597 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Becn1O88597 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Becn1O88597 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Becn1O88597 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Becn1O88597 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Becn1O88597 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Becn1O88597 Gm27454-201ENSMUST00000185090 204 ntBASIC20.79■□□□□ 0.92
Becn1O88597 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.79■□□□□ 0.92
Becn1O88597 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Becn1O88597 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Becn1O88597 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Becn1O88597 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
Becn1O88597 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Becn1O88597 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Becn1O88597 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Becn1O88597 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.78■□□□□ 0.92
Becn1O88597 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Becn1O88597 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.78■□□□□ 0.92
Becn1O88597 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Becn1O88597 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.78■□□□□ 0.92
Becn1O88597 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.78■□□□□ 0.92
Becn1O88597 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.78■□□□□ 0.92
Becn1O88597 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Becn1O88597 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Becn1O88597 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Becn1O88597 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Becn1O88597 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Becn1O88597 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Becn1O88597 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.77■□□□□ 0.92
Becn1O88597 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Becn1O88597 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.77■□□□□ 0.92
Becn1O88597 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Becn1O88597 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Becn1O88597 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Becn1O88597 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Becn1O88597 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Becn1O88597 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Becn1O88597 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Becn1O88597 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Becn1O88597 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Becn1O88597 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Becn1O88597 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.76■□□□□ 0.91
Becn1O88597 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Becn1O88597 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Becn1O88597 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Becn1O88597 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.76■□□□□ 0.91
Becn1O88597 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Becn1O88597 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Becn1O88597 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Becn1O88597 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Becn1O88597 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Becn1O88597 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Becn1O88597 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Becn1O88597 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Becn1O88597 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Becn1O88597 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Becn1O88597 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Becn1O88597 Gm43137-201ENSMUST00000198052 594 ntBASIC20.75■□□□□ 0.91
Becn1O88597 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Becn1O88597 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Becn1O88597 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Becn1O88597 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms