Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Cldn1O88551 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cldn1O88551 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.56■□□□□ 0.08
Cldn1O88551 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Gm7367-201ENSMUST00000057611 492 ntBASIC15.56■□□□□ 0.08
Cldn1O88551 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Cldn1O88551 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cldn1O88551 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cldn1O88551 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.55■□□□□ 0.08
Cldn1O88551 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Cldn1O88551 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.55■□□□□ 0.08
Cldn1O88551 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cldn1O88551 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cldn1O88551 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldn1O88551 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldn1O88551 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cldn1O88551 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.54■□□□□ 0.08
Cldn1O88551 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldn1O88551 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldn1O88551 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.54■□□□□ 0.08
Cldn1O88551 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldn1O88551 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.54■□□□□ 0.08
Cldn1O88551 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldn1O88551 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cldn1O88551 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldn1O88551 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cldn1O88551 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cldn1O88551 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldn1O88551 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldn1O88551 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldn1O88551 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.53■□□□□ 0.08
Cldn1O88551 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Cldn1O88551 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.53■□□□□ 0.08
Cldn1O88551 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldn1O88551 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldn1O88551 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldn1O88551 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldn1O88551 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldn1O88551 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Cldn1O88551 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cldn1O88551 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cldn1O88551 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Cldn1O88551 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldn1O88551 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cldn1O88551 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cldn1O88551 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cldn1O88551 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldn1O88551 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldn1O88551 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.52■□□□□ 0.08
Cldn1O88551 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.52■□□□□ 0.08
Cldn1O88551 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldn1O88551 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cldn1O88551 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cldn1O88551 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cldn1O88551 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.52■□□□□ 0.07
Cldn1O88551 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Cldn1O88551 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.51■□□□□ 0.07
Cldn1O88551 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Cldn1O88551 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cldn1O88551 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms