Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdh16O88338 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh16O88338 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh16O88338 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdh16O88338 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh16O88338 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.8■□□□□ 0.44
Cdh16O88338 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh16O88338 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh16O88338 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.8■□□□□ 0.44
Cdh16O88338 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh16O88338 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cdh16O88338 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh16O88338 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh16O88338 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh16O88338 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cdh16O88338 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh16O88338 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh16O88338 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh16O88338 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdh16O88338 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdh16O88338 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdh16O88338 Serp2-204ENSMUST00000228055 705 ntBASIC17.79■□□□□ 0.44
Cdh16O88338 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cdh16O88338 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cdh16O88338 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.79■□□□□ 0.44
Cdh16O88338 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.79■□□□□ 0.44
Cdh16O88338 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh16O88338 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh16O88338 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh16O88338 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Cdh16O88338 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh16O88338 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.78■□□□□ 0.44
Cdh16O88338 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh16O88338 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh16O88338 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh16O88338 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh16O88338 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh16O88338 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cdh16O88338 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh16O88338 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cdh16O88338 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh16O88338 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Cdh16O88338 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh16O88338 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh16O88338 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh16O88338 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.77■□□□□ 0.44
Cdh16O88338 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.77■□□□□ 0.44
Cdh16O88338 Gm21956-201ENSMUST00000179946 522 ntBASIC17.77■□□□□ 0.44
Cdh16O88338 Spcs1-204ENSMUST00000226782 949 ntBASIC17.77■□□□□ 0.44
Cdh16O88338 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh16O88338 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh16O88338 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh16O88338 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh16O88338 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.77■□□□□ 0.43
Cdh16O88338 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh16O88338 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh16O88338 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh16O88338 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Cdh16O88338 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.76■□□□□ 0.43
Cdh16O88338 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cdh16O88338 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.76■□□□□ 0.43
Cdh16O88338 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cdh16O88338 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.76■□□□□ 0.43
Cdh16O88338 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh16O88338 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.75■□□□□ 0.43
Cdh16O88338 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms