Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkbO55229 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkbO55229 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkbO55229 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ChkbO55229 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChkbO55229 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.35■□□□□ 0.69
ChkbO55229 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.35■□□□□ 0.69
ChkbO55229 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ChkbO55229 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ChkbO55229 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChkbO55229 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChkbO55229 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChkbO55229 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChkbO55229 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChkbO55229 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChkbO55229 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkbO55229 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
ChkbO55229 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkbO55229 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkbO55229 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkbO55229 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
ChkbO55229 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ChkbO55229 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.34■□□□□ 0.69
ChkbO55229 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ChkbO55229 Gm10493-201ENSMUST00000097270 612 ntBASIC19.34■□□□□ 0.69
ChkbO55229 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ChkbO55229 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ChkbO55229 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ChkbO55229 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ChkbO55229 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ChkbO55229 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ChkbO55229 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ChkbO55229 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkbO55229 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.33■□□□□ 0.68
ChkbO55229 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ChkbO55229 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkbO55229 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.33■□□□□ 0.68
ChkbO55229 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkbO55229 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkbO55229 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkbO55229 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkbO55229 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkbO55229 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkbO55229 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkbO55229 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.33■□□□□ 0.68
ChkbO55229 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkbO55229 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkbO55229 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.33■□□□□ 0.68
ChkbO55229 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.33■□□□□ 0.68
ChkbO55229 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ChkbO55229 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.32■□□□□ 0.68
ChkbO55229 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.32■□□□□ 0.68
ChkbO55229 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.32■□□□□ 0.68
ChkbO55229 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.32■□□□□ 0.68
ChkbO55229 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.32■□□□□ 0.68
ChkbO55229 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.32■□□□□ 0.68
ChkbO55229 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.32■□□□□ 0.68
ChkbO55229 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ChkbO55229 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ChkbO55229 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ChkbO55229 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ChkbO55229 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkbO55229 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ChkbO55229 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ChkbO55229 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChkbO55229 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChkbO55229 Gm42778-201ENSMUST00000199644 553 ntBASIC19.3■□□□□ 0.68
ChkbO55229 Gm9988-201ENSMUST00000069786 435 ntBASIC19.3■□□□□ 0.68
ChkbO55229 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChkbO55229 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChkbO55229 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.3■□□□□ 0.68
ChkbO55229 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChkbO55229 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.3■□□□□ 0.68
ChkbO55229 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ChkbO55229 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.29■□□□□ 0.68
ChkbO55229 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms