Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb2O55029 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Copb2O55029 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb2O55029 BC021767-201ENSMUST00000126387 1716 ntBASIC20.91■□□□□ 0.94
Copb2O55029 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.91■□□□□ 0.94
Copb2O55029 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.91■□□□□ 0.94
Copb2O55029 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb2O55029 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb2O55029 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Copb2O55029 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb2O55029 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Copb2O55029 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb2O55029 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb2O55029 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb2O55029 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Copb2O55029 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb2O55029 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb2O55029 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.9■□□□□ 0.94
Copb2O55029 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Copb2O55029 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.9■□□□□ 0.94
Copb2O55029 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.9■□□□□ 0.94
Copb2O55029 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb2O55029 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Copb2O55029 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb2O55029 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb2O55029 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Copb2O55029 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.89■□□□□ 0.94
Copb2O55029 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Copb2O55029 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Copb2O55029 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Copb2O55029 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.89■□□□□ 0.93
Copb2O55029 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Copb2O55029 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.89■□□□□ 0.93
Copb2O55029 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.89■□□□□ 0.93
Copb2O55029 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.89■□□□□ 0.93
Copb2O55029 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Copb2O55029 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Copb2O55029 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.88■□□□□ 0.93
Copb2O55029 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb2O55029 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb2O55029 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb2O55029 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb2O55029 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb2O55029 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb2O55029 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Copb2O55029 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.88■□□□□ 0.93
Copb2O55029 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb2O55029 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Copb2O55029 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb2O55029 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.87■□□□□ 0.93
Copb2O55029 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb2O55029 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Copb2O55029 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.87■□□□□ 0.93
Copb2O55029 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb2O55029 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Copb2O55029 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Copb2O55029 Gm715-201ENSMUST00000117865 831 ntBASIC20.87■□□□□ 0.93
Copb2O55029 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.87■□□□□ 0.93
Copb2O55029 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.87■□□□□ 0.93
Copb2O55029 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Copb2O55029 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb2O55029 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb2O55029 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb2O55029 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb2O55029 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Copb2O55029 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.87■□□□□ 0.93
Copb2O55029 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Copb2O55029 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Copb2O55029 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Copb2O55029 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Copb2O55029 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.86■□□□□ 0.93
Copb2O55029 Gm38285-201ENSMUST00000192928 922 ntBASIC20.86■□□□□ 0.93
Copb2O55029 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Copb2O55029 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Copb2O55029 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Copb2O55029 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Copb2O55029 Mir1199-201ENSMUST00000117015 119 ntBASIC20.85■□□□□ 0.93
Copb2O55029 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.85■□□□□ 0.93
Copb2O55029 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Copb2O55029 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Copb2O55029 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Copb2O55029 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.85■□□□□ 0.93
Copb2O55029 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.85■□□□□ 0.93
Copb2O55029 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.85■□□□□ 0.93
Copb2O55029 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Copb2O55029 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Copb2O55029 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.84■□□□□ 0.93
Copb2O55029 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Copb2O55029 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Copb2O55029 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Copb2O55029 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Copb2O55029 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Copb2O55029 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Copb2O55029 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Copb2O55029 Golph3-205ENSMUST00000228671 2842 ntBASIC20.83■□□□□ 0.93
Copb2O55029 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Copb2O55029 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.83■□□□□ 0.93
Copb2O55029 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Copb2O55029 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Copb2O55029 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms