Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Dkk1O54908 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Dkk1O54908 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Dkk1O54908 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Dkk1O54908 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Dkk1O54908 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Dkk1O54908 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Dkk1O54908 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.85■□□□□ 0.13
Dkk1O54908 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.85■□□□□ 0.13
Dkk1O54908 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Dkk1O54908 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.85■□□□□ 0.13
Dkk1O54908 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Dkk1O54908 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Dkk1O54908 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Dkk1O54908 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Dkk1O54908 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.85■□□□□ 0.13
Dkk1O54908 Gm3344-201ENSMUST00000169610 603 ntBASIC15.85■□□□□ 0.13
Dkk1O54908 Mir5133-201ENSMUST00000174955 77 ntBASIC15.85■□□□□ 0.13
Dkk1O54908 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.85■□□□□ 0.13
Dkk1O54908 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.85■□□□□ 0.13
Dkk1O54908 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.85■□□□□ 0.13
Dkk1O54908 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Dkk1O54908 Gm25131-201ENSMUST00000082653 151 ntBASIC15.85■□□□□ 0.13
Dkk1O54908 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Dkk1O54908 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Dkk1O54908 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Dkk1O54908 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.84■□□□□ 0.13
Dkk1O54908 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Dkk1O54908 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Dkk1O54908 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Dkk1O54908 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Dkk1O54908 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Dkk1O54908 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Dkk1O54908 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.84■□□□□ 0.13
Dkk1O54908 Gm16107-201ENSMUST00000162523 862 ntBASIC15.84■□□□□ 0.13
Dkk1O54908 CT009711.2-202ENSMUST00000224538 973 ntBASIC15.84■□□□□ 0.13
Dkk1O54908 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Dkk1O54908 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Dkk1O54908 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Dkk1O54908 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.84■□□□□ 0.13
Dkk1O54908 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Dkk1O54908 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Dkk1O54908 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Dkk1O54908 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.84■□□□□ 0.13
Dkk1O54908 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Dkk1O54908 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Dkk1O54908 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Dkk1O54908 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Dkk1O54908 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC15.83■□□□□ 0.12
Dkk1O54908 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC15.83■□□□□ 0.12
Dkk1O54908 Gm26524-201ENSMUST00000192339 390 ntBASIC15.83■□□□□ 0.12
Dkk1O54908 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dkk1O54908 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dkk1O54908 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dkk1O54908 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dkk1O54908 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dkk1O54908 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dkk1O54908 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dkk1O54908 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Dkk1O54908 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.82■□□□□ 0.12
Dkk1O54908 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.82■□□□□ 0.12
Dkk1O54908 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Dkk1O54908 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dkk1O54908 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Dkk1O54908 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dkk1O54908 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dkk1O54908 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dkk1O54908 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dkk1O54908 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Dkk1O54908 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Dkk1O54908 Gm18595-201ENSMUST00000175736 1068 ntBASIC15.81■□□□□ 0.12
Dkk1O54908 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Gm37629-201ENSMUST00000193635 1050 ntBASIC15.81■□□□□ 0.12
Dkk1O54908 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.81■□□□□ 0.12
Dkk1O54908 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Dkk1O54908 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dkk1O54908 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms