Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.36■□□□□ 0.53
ChkaO54804 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.36■□□□□ 0.53
ChkaO54804 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ChkaO54804 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ChkaO54804 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ChkaO54804 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ChkaO54804 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ChkaO54804 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ChkaO54804 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ChkaO54804 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.35■□□□□ 0.53
ChkaO54804 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
ChkaO54804 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ChkaO54804 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ChkaO54804 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ChkaO54804 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ChkaO54804 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.35■□□□□ 0.53
ChkaO54804 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ChkaO54804 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ChkaO54804 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ChkaO54804 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ChkaO54804 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ChkaO54804 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
ChkaO54804 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ChkaO54804 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.34■□□□□ 0.53
ChkaO54804 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.34■□□□□ 0.53
ChkaO54804 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ChkaO54804 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ChkaO54804 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ChkaO54804 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ChkaO54804 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ChkaO54804 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ChkaO54804 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ChkaO54804 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ChkaO54804 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ChkaO54804 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ChkaO54804 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ChkaO54804 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ChkaO54804 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ChkaO54804 Gm10033-202ENSMUST00000211874 928 ntBASIC18.33■□□□□ 0.52
ChkaO54804 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ChkaO54804 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ChkaO54804 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.32■□□□□ 0.52
ChkaO54804 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChkaO54804 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
ChkaO54804 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChkaO54804 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.32■□□□□ 0.52
ChkaO54804 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChkaO54804 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChkaO54804 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ChkaO54804 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.32■□□□□ 0.52
ChkaO54804 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChkaO54804 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChkaO54804 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChkaO54804 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChkaO54804 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChkaO54804 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChkaO54804 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ChkaO54804 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.31■□□□□ 0.52
ChkaO54804 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.31■□□□□ 0.52
ChkaO54804 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ChkaO54804 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ChkaO54804 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ChkaO54804 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.31■□□□□ 0.52
ChkaO54804 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ChkaO54804 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ChkaO54804 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ChkaO54804 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ChkaO54804 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ChkaO54804 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.3■□□□□ 0.52
ChkaO54804 Gm26571-201ENSMUST00000181399 666 ntBASIC18.3■□□□□ 0.52
ChkaO54804 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.3■□□□□ 0.52
ChkaO54804 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChkaO54804 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ChkaO54804 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ChkaO54804 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.29■□□□□ 0.52
ChkaO54804 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ChkaO54804 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
ChkaO54804 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ChkaO54804 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ChkaO54804 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ChkaO54804 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ChkaO54804 Gm18284-201ENSMUST00000172604 624 ntBASIC18.29■□□□□ 0.52
ChkaO54804 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ChkaO54804 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ChkaO54804 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.29■□□□□ 0.52
ChkaO54804 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
ChkaO54804 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms