Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca4O35600 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Abca4O35600 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.15■□□□□ 0.34
Abca4O35600 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.15■□□□□ 0.34
Abca4O35600 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca4O35600 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca4O35600 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.15■□□□□ 0.34
Abca4O35600 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca4O35600 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca4O35600 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca4O35600 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca4O35600 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abca4O35600 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Abca4O35600 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Abca4O35600 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.14■□□□□ 0.33
Abca4O35600 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abca4O35600 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.14■□□□□ 0.33
Abca4O35600 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.14■□□□□ 0.33
Abca4O35600 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abca4O35600 Gm7791-201ENSMUST00000219066 539 ntBASIC17.14■□□□□ 0.33
Abca4O35600 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abca4O35600 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Abca4O35600 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abca4O35600 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Abca4O35600 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abca4O35600 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abca4O35600 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abca4O35600 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abca4O35600 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.14■□□□□ 0.33
Abca4O35600 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abca4O35600 Gm11594-201ENSMUST00000122313 162 ntBASIC17.13■□□□□ 0.33
Abca4O35600 Gm43575-201ENSMUST00000196420 516 ntBASIC17.13■□□□□ 0.33
Abca4O35600 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abca4O35600 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Abca4O35600 Gm11355-201ENSMUST00000121120 306 ntBASIC17.13■□□□□ 0.33
Abca4O35600 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Abca4O35600 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.13■□□□□ 0.33
Abca4O35600 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abca4O35600 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Abca4O35600 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.12■□□□□ 0.33
Abca4O35600 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abca4O35600 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.12■□□□□ 0.33
Abca4O35600 Auts2-212ENSMUST00000178555 309 ntBASIC17.12■□□□□ 0.33
Abca4O35600 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.12■□□□□ 0.33
Abca4O35600 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.12■□□□□ 0.33
Abca4O35600 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Abca4O35600 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abca4O35600 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Abca4O35600 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Abca4O35600 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Abca4O35600 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Abca4O35600 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abca4O35600 Gm7370-201ENSMUST00000219471 767 ntBASIC17.12■□□□□ 0.33
Abca4O35600 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abca4O35600 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abca4O35600 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca4O35600 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca4O35600 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca4O35600 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.11■□□□□ 0.33
Abca4O35600 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Abca4O35600 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Abca4O35600 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Abca4O35600 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.11■□□□□ 0.33
Abca4O35600 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca4O35600 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Abca4O35600 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca4O35600 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abca4O35600 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.1■□□□□ 0.33
Abca4O35600 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.1■□□□□ 0.33
Abca4O35600 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Abca4O35600 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Abca4O35600 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Abca4O35600 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.1■□□□□ 0.33
Abca4O35600 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Abca4O35600 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Abca4O35600 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abca4O35600 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abca4O35600 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.09■□□□□ 0.33
Abca4O35600 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abca4O35600 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.09■□□□□ 0.33
Abca4O35600 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.09■□□□□ 0.33
Abca4O35600 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.09■□□□□ 0.33
Abca4O35600 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.09■□□□□ 0.33
Abca4O35600 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms