Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Slc1a6O35544 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.94■□□□□ 0.46
Slc1a6O35544 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Slc1a6O35544 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.94■□□□□ 0.46
Slc1a6O35544 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc1a6O35544 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc1a6O35544 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc1a6O35544 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc1a6O35544 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc1a6O35544 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Slc1a6O35544 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.93■□□□□ 0.46
Slc1a6O35544 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.93■□□□□ 0.46
Slc1a6O35544 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc1a6O35544 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Slc1a6O35544 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Slc1a6O35544 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.92■□□□□ 0.46
Slc1a6O35544 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Slc1a6O35544 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.92■□□□□ 0.46
Slc1a6O35544 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc1a6O35544 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.92■□□□□ 0.46
Slc1a6O35544 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc1a6O35544 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.91■□□□□ 0.46
Slc1a6O35544 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc1a6O35544 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc1a6O35544 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Slc1a6O35544 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc1a6O35544 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc1a6O35544 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc1a6O35544 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc1a6O35544 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc1a6O35544 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.9■□□□□ 0.46
Slc1a6O35544 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Gm21956-201ENSMUST00000179946 522 ntBASIC17.9■□□□□ 0.46
Slc1a6O35544 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.9■□□□□ 0.46
Slc1a6O35544 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Gm13241-201ENSMUST00000094493 780 ntBASIC17.9■□□□□ 0.46
Slc1a6O35544 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc1a6O35544 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
Slc1a6O35544 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Slc1a6O35544 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slc1a6O35544 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc1a6O35544 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Slc1a6O35544 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc1a6O35544 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.89■□□□□ 0.45
Slc1a6O35544 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc1a6O35544 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc1a6O35544 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc1a6O35544 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc1a6O35544 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc1a6O35544 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc1a6O35544 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slc1a6O35544 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc1a6O35544 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc1a6O35544 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc1a6O35544 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Slc1a6O35544 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc1a6O35544 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc1a6O35544 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc1a6O35544 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.88■□□□□ 0.45
Slc1a6O35544 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc1a6O35544 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc1a6O35544 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc1a6O35544 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc1a6O35544 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Slc1a6O35544 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms