Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cpsf2O35218 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf2O35218 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf2O35218 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cpsf2O35218 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf2O35218 Gm13146-201ENSMUST00000118508 780 ntBASIC19.44■□□□□ 0.7
Cpsf2O35218 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.44■□□□□ 0.7
Cpsf2O35218 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf2O35218 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf2O35218 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Cpsf2O35218 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.44■□□□□ 0.7
Cpsf2O35218 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf2O35218 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.44■□□□□ 0.7
Cpsf2O35218 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cpsf2O35218 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.43■□□□□ 0.7
Cpsf2O35218 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf2O35218 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf2O35218 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf2O35218 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf2O35218 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf2O35218 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf2O35218 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cpsf2O35218 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf2O35218 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.43■□□□□ 0.7
Cpsf2O35218 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf2O35218 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf2O35218 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf2O35218 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf2O35218 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf2O35218 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.42■□□□□ 0.7
Cpsf2O35218 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Cpsf2O35218 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf2O35218 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.42■□□□□ 0.7
Cpsf2O35218 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
Cpsf2O35218 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf2O35218 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf2O35218 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf2O35218 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf2O35218 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cpsf2O35218 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cpsf2O35218 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.42■□□□□ 0.7
Cpsf2O35218 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf2O35218 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.41■□□□□ 0.7
Cpsf2O35218 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cpsf2O35218 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf2O35218 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.41■□□□□ 0.7
Cpsf2O35218 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.41■□□□□ 0.7
Cpsf2O35218 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.41■□□□□ 0.7
Cpsf2O35218 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cpsf2O35218 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf2O35218 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cpsf2O35218 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf2O35218 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf2O35218 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf2O35218 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Cpsf2O35218 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf2O35218 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cpsf2O35218 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cpsf2O35218 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf2O35218 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cpsf2O35218 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.4■□□□□ 0.7
Cpsf2O35218 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf2O35218 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf2O35218 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cpsf2O35218 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.4■□□□□ 0.7
Cpsf2O35218 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf2O35218 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpsf2O35218 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Cpsf2O35218 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf2O35218 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf2O35218 Gm13534-201ENSMUST00000121169 513 ntBASIC19.39■□□□□ 0.69
Cpsf2O35218 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.39■□□□□ 0.69
Cpsf2O35218 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cpsf2O35218 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Cpsf2O35218 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf2O35218 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf2O35218 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf2O35218 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.39■□□□□ 0.69
Cpsf2O35218 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf2O35218 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf2O35218 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.39■□□□□ 0.69
Cpsf2O35218 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cpsf2O35218 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Cpsf2O35218 Gm13234-201ENSMUST00000120010 747 ntBASIC19.38■□□□□ 0.69
Cpsf2O35218 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Cpsf2O35218 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.38■□□□□ 0.69
Cpsf2O35218 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf2O35218 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cpsf2O35218 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.38■□□□□ 0.69
Cpsf2O35218 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf2O35218 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf2O35218 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf2O35218 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf2O35218 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf2O35218 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cpsf2O35218 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf2O35218 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf2O35218 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf2O35218 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf2O35218 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms