Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.23■□□□□ 0.19
Alx4O35137 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Alx4O35137 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.22■□□□□ 0.19
Alx4O35137 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Alx4O35137 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Alx4O35137 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx4O35137 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Alx4O35137 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx4O35137 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx4O35137 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx4O35137 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Alx4O35137 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx4O35137 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx4O35137 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx4O35137 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Alx4O35137 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Alx4O35137 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Alx4O35137 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Alx4O35137 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx4O35137 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Alx4O35137 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Alx4O35137 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.21■□□□□ 0.18
Alx4O35137 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Alx4O35137 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Alx4O35137 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Alx4O35137 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.2■□□□□ 0.18
Alx4O35137 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Alx4O35137 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Gm12821-201ENSMUST00000120022 600 ntBASIC16.2■□□□□ 0.18
Alx4O35137 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Alx4O35137 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.2■□□□□ 0.18
Alx4O35137 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.2■□□□□ 0.18
Alx4O35137 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Alx4O35137 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.19■□□□□ 0.18
Alx4O35137 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.19■□□□□ 0.18
Alx4O35137 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Gm6139-201ENSMUST00000079261 882 ntBASIC16.19■□□□□ 0.18
Alx4O35137 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.19■□□□□ 0.18
Alx4O35137 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Alx4O35137 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Alx4O35137 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Alx4O35137 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Alx4O35137 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.18■□□□□ 0.18
Alx4O35137 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx4O35137 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx4O35137 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx4O35137 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Alx4O35137 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Alx4O35137 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Alx4O35137 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx4O35137 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx4O35137 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.18■□□□□ 0.18
Alx4O35137 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx4O35137 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Alx4O35137 Gm13146-201ENSMUST00000118508 780 ntBASIC16.18■□□□□ 0.18
Alx4O35137 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.18■□□□□ 0.18
Alx4O35137 Gm40848-201ENSMUST00000221998 324 ntBASIC16.18■□□□□ 0.18
Alx4O35137 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx4O35137 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Alx4O35137 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Alx4O35137 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms