Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
OtpO09113 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
OtpO09113 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
OtpO09113 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.21■□□□□ 0.19
OtpO09113 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
OtpO09113 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
OtpO09113 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.21■□□□□ 0.19
OtpO09113 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.21■□□□□ 0.19
OtpO09113 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.21■□□□□ 0.19
OtpO09113 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.21■□□□□ 0.19
OtpO09113 Gm5874-201ENSMUST00000096101 508 ntBASIC16.21■□□□□ 0.19
OtpO09113 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
OtpO09113 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
OtpO09113 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
OtpO09113 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
OtpO09113 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
OtpO09113 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
OtpO09113 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.21■□□□□ 0.19
OtpO09113 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
OtpO09113 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
OtpO09113 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
OtpO09113 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
OtpO09113 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
OtpO09113 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
OtpO09113 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
OtpO09113 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
OtpO09113 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OtpO09113 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
OtpO09113 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
OtpO09113 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
OtpO09113 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
OtpO09113 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
OtpO09113 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OtpO09113 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
OtpO09113 Gm42642-201ENSMUST00000200683 355 ntBASIC16.2■□□□□ 0.18
OtpO09113 Gm10033-202ENSMUST00000211874 928 ntBASIC16.2■□□□□ 0.18
OtpO09113 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
OtpO09113 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
OtpO09113 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
OtpO09113 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OtpO09113 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.19■□□□□ 0.18
OtpO09113 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
OtpO09113 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OtpO09113 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.19■□□□□ 0.18
OtpO09113 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OtpO09113 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
OtpO09113 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OtpO09113 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OtpO09113 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
OtpO09113 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
OtpO09113 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
OtpO09113 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OtpO09113 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OtpO09113 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OtpO09113 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OtpO09113 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OtpO09113 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OtpO09113 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
OtpO09113 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OtpO09113 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
OtpO09113 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OtpO09113 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OtpO09113 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.18■□□□□ 0.18
OtpO09113 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.18■□□□□ 0.18
OtpO09113 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.18■□□□□ 0.18
OtpO09113 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
OtpO09113 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OtpO09113 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.17■□□□□ 0.18
OtpO09113 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
OtpO09113 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.17■□□□□ 0.18
OtpO09113 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Gm26571-201ENSMUST00000181399 666 ntBASIC16.17■□□□□ 0.18
OtpO09113 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.17■□□□□ 0.18
OtpO09113 Gm7514-201ENSMUST00000209475 934 ntBASIC16.17■□□□□ 0.18
OtpO09113 Gm18671-201ENSMUST00000214826 683 ntBASIC16.17■□□□□ 0.18
OtpO09113 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.17■□□□□ 0.18
OtpO09113 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OtpO09113 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OtpO09113 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OtpO09113 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.16■□□□□ 0.18
OtpO09113 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OtpO09113 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
OtpO09113 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
OtpO09113 Gm10849-201ENSMUST00000100397 618 ntBASIC16.16■□□□□ 0.18
OtpO09113 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms