Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2b3O09039 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2b3O09039 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sh2b3O09039 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2b3O09039 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2b3O09039 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2b3O09039 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2b3O09039 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2b3O09039 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2b3O09039 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.19■□□□□ 0.18
Sh2b3O09039 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.19■□□□□ 0.18
Sh2b3O09039 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sh2b3O09039 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2b3O09039 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sh2b3O09039 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2b3O09039 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2b3O09039 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.18■□□□□ 0.18
Sh2b3O09039 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2b3O09039 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2b3O09039 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2b3O09039 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sh2b3O09039 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Sh2b3O09039 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2b3O09039 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2b3O09039 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2b3O09039 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2b3O09039 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2b3O09039 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2b3O09039 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2b3O09039 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2b3O09039 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2b3O09039 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sh2b3O09039 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
Sh2b3O09039 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2b3O09039 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2b3O09039 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sh2b3O09039 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2b3O09039 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.16■□□□□ 0.18
Sh2b3O09039 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2b3O09039 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sh2b3O09039 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2b3O09039 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2b3O09039 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2b3O09039 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2b3O09039 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2b3O09039 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2b3O09039 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sh2b3O09039 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2b3O09039 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Sh2b3O09039 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh2b3O09039 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh2b3O09039 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sh2b3O09039 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh2b3O09039 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh2b3O09039 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh2b3O09039 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh2b3O09039 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh2b3O09039 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh2b3O09039 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh2b3O09039 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh2b3O09039 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Sh2b3O09039 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh2b3O09039 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh2b3O09039 Gm12896-201ENSMUST00000118430 226 ntBASIC16.13■□□□□ 0.17
Sh2b3O09039 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh2b3O09039 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh2b3O09039 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh2b3O09039 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh2b3O09039 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.13■□□□□ 0.17
Sh2b3O09039 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh2b3O09039 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh2b3O09039 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh2b3O09039 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms