Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf3O08791 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf3O08791 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf3O08791 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf3O08791 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf3O08791 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.85■□□□□ 0.61
Ebf3O08791 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ebf3O08791 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.85■□□□□ 0.61
Ebf3O08791 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf3O08791 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf3O08791 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf3O08791 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf3O08791 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf3O08791 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf3O08791 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ebf3O08791 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf3O08791 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf3O08791 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ebf3O08791 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf3O08791 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf3O08791 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ebf3O08791 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf3O08791 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf3O08791 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ebf3O08791 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf3O08791 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Ebf3O08791 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf3O08791 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf3O08791 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ebf3O08791 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ebf3O08791 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ebf3O08791 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ebf3O08791 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf3O08791 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.83■□□□□ 0.6
Ebf3O08791 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.83■□□□□ 0.6
Ebf3O08791 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf3O08791 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf3O08791 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf3O08791 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf3O08791 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf3O08791 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf3O08791 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf3O08791 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ebf3O08791 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf3O08791 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.82■□□□□ 0.6
Ebf3O08791 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf3O08791 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.82■□□□□ 0.6
Ebf3O08791 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf3O08791 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf3O08791 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf3O08791 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ebf3O08791 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ebf3O08791 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Ebf3O08791 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Ebf3O08791 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ebf3O08791 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf3O08791 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.81■□□□□ 0.6
Ebf3O08791 Gm15565-201ENSMUST00000118890 427 ntBASIC18.81■□□□□ 0.6
Ebf3O08791 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.81■□□□□ 0.6
Ebf3O08791 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.81■□□□□ 0.6
Ebf3O08791 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.81■□□□□ 0.6
Ebf3O08791 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf3O08791 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf3O08791 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf3O08791 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf3O08791 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Ebf3O08791 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf3O08791 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf3O08791 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf3O08791 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf3O08791 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf3O08791 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf3O08791 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ebf3O08791 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf3O08791 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf3O08791 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf3O08791 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf3O08791 Gm37055-201ENSMUST00000191866 133 ntBASIC18.8■□□□□ 0.6
Ebf3O08791 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf3O08791 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf3O08791 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Ebf3O08791 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.8■□□□□ 0.6
Ebf3O08791 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ebf3O08791 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.8■□□□□ 0.6
Ebf3O08791 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf3O08791 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf3O08791 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf3O08791 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf3O08791 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.79■□□□□ 0.6
Ebf3O08791 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf3O08791 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf3O08791 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf3O08791 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.79■□□□□ 0.6
Ebf3O08791 Mir1199-201ENSMUST00000117015 119 ntBASIC18.79■□□□□ 0.6
Ebf3O08791 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.79■□□□□ 0.6
Ebf3O08791 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.79■□□□□ 0.6
Ebf3O08791 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.79■□□□□ 0.6
Ebf3O08791 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf3O08791 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf3O08791 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms