Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgo2bJ3QMK1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sgo2bJ3QMK1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.13■□□□□ 0.49
Sgo2bJ3QMK1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Fst-202ENSMUST00000223640 2612 ntBASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sgo2bJ3QMK1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Sgo2bJ3QMK1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sgo2bJ3QMK1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Gm22325-201ENSMUST00000158904 308 ntBASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Gm42569-201ENSMUST00000200539 472 ntBASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Sgo2bJ3QMK1 Rarb-207ENSMUST00000225921 2756 ntBASIC18.08■□□□□ 0.49
Sgo2bJ3QMK1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sgo2bJ3QMK1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sgo2bJ3QMK1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.08■□□□□ 0.48
Sgo2bJ3QMK1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sgo2bJ3QMK1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.08■□□□□ 0.48
Sgo2bJ3QMK1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sgo2bJ3QMK1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sgo2bJ3QMK1 Tgds-204ENSMUST00000228543 1594 ntBASIC18.08■□□□□ 0.48
Sgo2bJ3QMK1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sgo2bJ3QMK1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sgo2bJ3QMK1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sgo2bJ3QMK1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sgo2bJ3QMK1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sgo2bJ3QMK1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sgo2bJ3QMK1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sgo2bJ3QMK1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Sgo2bJ3QMK1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms