Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-3J3QMG8 Gm13148-201ENSMUST00000118892 745 ntBASIC16■□□□□ 0.15
Trav13d-3J3QMG8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16■□□□□ 0.15
Trav13d-3J3QMG8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-3J3QMG8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-3J3QMG8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-3J3QMG8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Trav13d-3J3QMG8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16■□□□□ 0.15
Trav13d-3J3QMG8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Mir5133-201ENSMUST00000174955 77 ntBASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-3J3QMG8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-3J3QMG8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.97■□□□□ 0.15
Trav13d-3J3QMG8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Tgds-204ENSMUST00000228543 1594 ntBASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav13d-3J3QMG8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav13d-3J3QMG8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav13d-3J3QMG8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav13d-3J3QMG8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Gm12933-201ENSMUST00000120203 872 ntBASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav13d-3J3QMG8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms