Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim55G3X8Y1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.7■□□□□ 0.58
Trim55G3X8Y1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim55G3X8Y1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim55G3X8Y1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim55G3X8Y1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Trim55G3X8Y1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim55G3X8Y1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim55G3X8Y1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim55G3X8Y1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim55G3X8Y1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim55G3X8Y1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim55G3X8Y1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim55G3X8Y1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim55G3X8Y1 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.68■□□□□ 0.58
Trim55G3X8Y1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim55G3X8Y1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Gm15820-201ENSMUST00000201566 728 ntBASIC18.66■□□□□ 0.58
Trim55G3X8Y1 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim55G3X8Y1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim55G3X8Y1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim55G3X8Y1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim55G3X8Y1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim55G3X8Y1 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.65■□□□□ 0.58
Trim55G3X8Y1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim55G3X8Y1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim55G3X8Y1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim55G3X8Y1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim55G3X8Y1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim55G3X8Y1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.64■□□□□ 0.58
Trim55G3X8Y1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim55G3X8Y1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.64■□□□□ 0.57
Trim55G3X8Y1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms