Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Gm42778-201ENSMUST00000199644 553 ntBASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Gm5874-201ENSMUST00000096101 508 ntBASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh9F8VPK8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh9F8VPK8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.64■□□□□ 0.58
Pcdh9F8VPK8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Pcdh9F8VPK8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Gm18284-201ENSMUST00000172604 624 ntBASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdh9F8VPK8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh9F8VPK8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdh9F8VPK8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh9F8VPK8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh9F8VPK8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh9F8VPK8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms