Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Gm11594-201ENSMUST00000122313 162 ntBASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Gm13474-201ENSMUST00000122466 815 ntBASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc188F6WEU2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Mir1668-201ENSMUST00000184114 107 ntBASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.49■□□□□ 0.55
Ccdc188F6WEU2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.48■□□□□ 0.55
Ccdc188F6WEU2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc188F6WEU2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc188F6WEU2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc188F6WEU2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc188F6WEU2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc188F6WEU2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc188F6WEU2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc188F6WEU2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc188F6WEU2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.47■□□□□ 0.55
Ccdc188F6WEU2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.47■□□□□ 0.55
Ccdc188F6WEU2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.47■□□□□ 0.55
Ccdc188F6WEU2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc188F6WEU2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc188F6WEU2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc188F6WEU2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc188F6WEU2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc188F6WEU2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ccdc188F6WEU2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Gm11355-201ENSMUST00000121120 306 ntBASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Gm7791-201ENSMUST00000219066 539 ntBASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc188F6WEU2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.46■□□□□ 0.54
Ccdc188F6WEU2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Gm43347-201ENSMUST00000200226 580 ntBASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc188F6WEU2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 Olfr129-201ENSMUST00000122318 993 ntBASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ccdc188F6WEU2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms