Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 Gm27801-201ENSMUST00000184174 223 ntBASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc28a1E9PXX9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc28a1E9PXX9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
Slc28a1E9PXX9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 Gm11421-201ENSMUST00000122124 294 ntBASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc28a1E9PXX9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Gm12251-201ENSMUST00000117893 792 ntBASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Gm43137-201ENSMUST00000198052 594 ntBASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc28a1E9PXX9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc28a1E9PXX9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Smad6-203ENSMUST00000179458 273 ntBASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slc28a1E9PXX9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms