Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Pcdh17E9PXF0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Gm6576-201ENSMUST00000169678 883 ntBASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh17E9PXF0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Mir7071-201ENSMUST00000184847 69 ntBASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Flg-201ENSMUST00000050758 1488 ntBASIC16.86■□□□□ 0.29
Pcdh17E9PXF0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh17E9PXF0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Gm11927-201ENSMUST00000118472 759 ntBASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Gm15378-201ENSMUST00000121894 207 ntBASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh17E9PXF0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh17E9PXF0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh17E9PXF0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh17E9PXF0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms