Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28043E0CXC2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Gm28043E0CXC2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28043E0CXC2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.21■□□□□ 0.51
Gm28043E0CXC2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28043E0CXC2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
Gm28043E0CXC2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.19■□□□□ 0.5
Gm28043E0CXC2 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.19■□□□□ 0.5
Gm28043E0CXC2 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Gm9988-201ENSMUST00000069786 435 ntBASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28043E0CXC2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms