Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.43■□□□□ 0.22
Gm3543D3Z235 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3543D3Z235 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Gm27011-201ENSMUST00000182352 972 ntBASIC16.41■□□□□ 0.22
Gm3543D3Z235 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.41■□□□□ 0.22
Gm3543D3Z235 Grk6-206ENSMUST00000224995 2971 ntBASIC16.41■□□□□ 0.22
Gm3543D3Z235 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.41■□□□□ 0.22
Gm3543D3Z235 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3543D3Z235 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.4■□□□□ 0.22
Gm3543D3Z235 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.4■□□□□ 0.22
Gm3543D3Z235 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Gm3543D3Z235 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.4■□□□□ 0.22
Gm3543D3Z235 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3543D3Z235 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Gm3543D3Z235 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm3543D3Z235 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Rab3c-203ENSMUST00000224180 967 ntBASIC16.39■□□□□ 0.21
Gm3543D3Z235 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.39■□□□□ 0.21
Gm3543D3Z235 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm3543D3Z235 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3543D3Z235 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3543D3Z235 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Gm3543D3Z235 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.38■□□□□ 0.21
Gm3543D3Z235 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3543D3Z235 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm3543D3Z235 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms