Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Ptchd4B9EKX1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ptchd4B9EKX1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd4B9EKX1 Gm5417-201ENSMUST00000079706 384 ntBASIC19.61■□□□□ 0.73
Ptchd4B9EKX1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd4B9EKX1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd4B9EKX1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ptchd4B9EKX1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ptchd4B9EKX1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ptchd4B9EKX1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.6■□□□□ 0.73
Ptchd4B9EKX1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.6■□□□□ 0.73
Ptchd4B9EKX1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Ptchd4B9EKX1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ptchd4B9EKX1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ptchd4B9EKX1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.6■□□□□ 0.73
Ptchd4B9EKX1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Gm21814-202ENSMUST00000203277 873 ntBASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ptchd4B9EKX1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ptchd4B9EKX1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ptchd4B9EKX1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ptchd4B9EKX1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Ptchd4B9EKX1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ptchd4B9EKX1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ptchd4B9EKX1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ptchd4B9EKX1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Ptchd4B9EKX1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ptchd4B9EKX1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ptchd4B9EKX1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Ptchd4B9EKX1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ptchd4B9EKX1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ptchd4B9EKX1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ptchd4B9EKX1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Ptchd4B9EKX1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ptchd4B9EKX1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.56■□□□□ 0.72
Ptchd4B9EKX1 Gm12382-201ENSMUST00000122005 922 ntBASIC19.56■□□□□ 0.72
Ptchd4B9EKX1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd4B9EKX1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd4B9EKX1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd4B9EKX1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd4B9EKX1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd4B9EKX1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd4B9EKX1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ptchd4B9EKX1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 BC021767-201ENSMUST00000126387 1716 ntBASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd4B9EKX1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Gm11643-201ENSMUST00000119578 864 ntBASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms