Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.33■■□□□ 1.01
Usp42B2RQC2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp42B2RQC2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp42B2RQC2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp42B2RQC2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp42B2RQC2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp42B2RQC2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.33■■□□□ 1
Usp42B2RQC2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Usp42B2RQC2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Usp42B2RQC2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp42B2RQC2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.32■■□□□ 1
Usp42B2RQC2 Dio3-201ENSMUST00000097228 1449 ntBASIC21.32■■□□□ 1
Usp42B2RQC2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp42B2RQC2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.32■■□□□ 1
Usp42B2RQC2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.32■■□□□ 1
Usp42B2RQC2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.32■■□□□ 1
Usp42B2RQC2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.32■■□□□ 1
Usp42B2RQC2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.31■■□□□ 1
Usp42B2RQC2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.31■■□□□ 1
Usp42B2RQC2 Gm2559-201ENSMUST00000201323 363 ntBASIC21.31■■□□□ 1
Usp42B2RQC2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.31■■□□□ 1
Usp42B2RQC2 Zfp783-201ENSMUST00000095946 670 ntBASIC21.31■■□□□ 1
Usp42B2RQC2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp42B2RQC2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Usp42B2RQC2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.31■■□□□ 1
Usp42B2RQC2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.31■■□□□ 1
Usp42B2RQC2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.31■■□□□ 1
Usp42B2RQC2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp42B2RQC2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Usp42B2RQC2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp42B2RQC2 Gm38285-201ENSMUST00000192928 922 ntBASIC21.3■■□□□ 1
Usp42B2RQC2 Gm20049-201ENSMUST00000219950 730 ntBASIC21.3■■□□□ 1
Usp42B2RQC2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp42B2RQC2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.3■■□□□ 1
Usp42B2RQC2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp42B2RQC2 Gm12527-201ENSMUST00000117967 564 ntBASIC21.29■■□□□ 1
Usp42B2RQC2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.29■■□□□ 1
Usp42B2RQC2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Flg-201ENSMUST00000050758 1488 ntBASIC21.29■■□□□ 1
Usp42B2RQC2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Usp42B2RQC2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Usp42B2RQC2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Usp42B2RQC2 Gm12896-201ENSMUST00000118430 226 ntBASIC21.29■■□□□ 1
Usp42B2RQC2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.29■■□□□ 1
Usp42B2RQC2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.29■■□□□ 1
Usp42B2RQC2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp42B2RQC2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Usp42B2RQC2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.28■■□□□ 1
Usp42B2RQC2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp42B2RQC2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp42B2RQC2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Usp42B2RQC2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.28■■□□□ 1
Usp42B2RQC2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp42B2RQC2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp42B2RQC2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Usp42B2RQC2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
Usp42B2RQC2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.28■■□□□ 1
Usp42B2RQC2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp42B2RQC2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp42B2RQC2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp42B2RQC2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Usp42B2RQC2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp42B2RQC2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp42B2RQC2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Usp42B2RQC2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp42B2RQC2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Usp42B2RQC2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Usp42B2RQC2 Gm11927-201ENSMUST00000118472 759 ntBASIC21.27■□□□□ 0.99
Usp42B2RQC2 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.27■□□□□ 0.99
Usp42B2RQC2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Usp42B2RQC2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Usp42B2RQC2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.26■□□□□ 0.99
Usp42B2RQC2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp42B2RQC2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms