Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Gm27405-201ENSMUST00000184201 112 ntBASIC20.1■□□□□ 0.81
Herc3A6H6S0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.1■□□□□ 0.81
Herc3A6H6S0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Herc3A6H6S0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.1■□□□□ 0.81
Herc3A6H6S0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Herc3A6H6S0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herc3A6H6S0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herc3A6H6S0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Herc3A6H6S0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herc3A6H6S0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Herc3A6H6S0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herc3A6H6S0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herc3A6H6S0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herc3A6H6S0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herc3A6H6S0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.09■□□□□ 0.81
Herc3A6H6S0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.09■□□□□ 0.81
Herc3A6H6S0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.09■□□□□ 0.81
Herc3A6H6S0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herc3A6H6S0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
Herc3A6H6S0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herc3A6H6S0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herc3A6H6S0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Herc3A6H6S0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Herc3A6H6S0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.08■□□□□ 0.81
Herc3A6H6S0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Herc3A6H6S0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Herc3A6H6S0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Herc3A6H6S0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Herc3A6H6S0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.07■□□□□ 0.8
Herc3A6H6S0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Herc3A6H6S0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Herc3A6H6S0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.07■□□□□ 0.8
Herc3A6H6S0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Herc3A6H6S0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Herc3A6H6S0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Herc3A6H6S0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.07■□□□□ 0.8
Herc3A6H6S0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
Herc3A6H6S0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Herc3A6H6S0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Herc3A6H6S0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Herc3A6H6S0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Herc3A6H6S0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Herc3A6H6S0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Herc3A6H6S0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herc3A6H6S0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.04■□□□□ 0.8
Herc3A6H6S0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Herc3A6H6S0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Herc3A6H6S0 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.04■□□□□ 0.8
Herc3A6H6S0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herc3A6H6S0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Herc3A6H6S0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Herc3A6H6S0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Herc3A6H6S0 Gm13148-201ENSMUST00000118892 745 ntBASIC20.03■□□□□ 0.8
Herc3A6H6S0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Herc3A6H6S0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.03■□□□□ 0.8
Herc3A6H6S0 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.03■□□□□ 0.8
Herc3A6H6S0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Herc3A6H6S0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Herc3A6H6S0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Herc3A6H6S0 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.02■□□□□ 0.8
Herc3A6H6S0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms