Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt28A6BLY7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.24■□□□□ 0.83
Krt28A6BLY7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt28A6BLY7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt28A6BLY7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt28A6BLY7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt28A6BLY7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.24■□□□□ 0.83
Krt28A6BLY7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Gm17661-201ENSMUST00000170317 270 ntBASIC20.23■□□□□ 0.83
Krt28A6BLY7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt28A6BLY7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt28A6BLY7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.22■□□□□ 0.83
Krt28A6BLY7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Krt28A6BLY7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Gm38027-201ENSMUST00000192315 235 ntBASIC20.22■□□□□ 0.83
Krt28A6BLY7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt28A6BLY7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.22■□□□□ 0.83
Krt28A6BLY7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Krt28A6BLY7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt28A6BLY7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt28A6BLY7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.21■□□□□ 0.83
Krt28A6BLY7 Gm17971-201ENSMUST00000190239 806 ntBASIC20.21■□□□□ 0.83
Krt28A6BLY7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.21■□□□□ 0.83
Krt28A6BLY7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt28A6BLY7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt28A6BLY7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt28A6BLY7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt28A6BLY7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt28A6BLY7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt28A6BLY7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Krt28A6BLY7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Krt28A6BLY7 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.2■□□□□ 0.82
Krt28A6BLY7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt28A6BLY7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt28A6BLY7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Krt28A6BLY7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt28A6BLY7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt28A6BLY7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
Krt28A6BLY7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Krt28A6BLY7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Krt28A6BLY7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt28A6BLY7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt28A6BLY7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Krt28A6BLY7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Krt28A6BLY7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt28A6BLY7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Krt28A6BLY7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt28A6BLY7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt28A6BLY7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Krt28A6BLY7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Krt28A6BLY7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt28A6BLY7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt28A6BLY7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Krt28A6BLY7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Krt28A6BLY7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Krt28A6BLY7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.18■□□□□ 0.82
Krt28A6BLY7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Krt28A6BLY7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt28A6BLY7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt28A6BLY7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.17■□□□□ 0.82
Krt28A6BLY7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt28A6BLY7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.17■□□□□ 0.82
Krt28A6BLY7 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.17■□□□□ 0.82
Krt28A6BLY7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.17■□□□□ 0.82
Krt28A6BLY7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt28A6BLY7 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.17■□□□□ 0.82
Krt28A6BLY7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt28A6BLY7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt28A6BLY7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Krt28A6BLY7 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.16■□□□□ 0.82
Krt28A6BLY7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Krt28A6BLY7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Krt28A6BLY7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Krt28A6BLY7 Gm7461-201ENSMUST00000058918 827 ntBASIC20.16■□□□□ 0.82
Krt28A6BLY7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Krt28A6BLY7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Krt28A6BLY7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Krt28A6BLY7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms