Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col6a4A2AX52 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Gm37292-201ENSMUST00000192062 758 ntBASIC15.3■□□□□ 0.04
Col6a4A2AX52 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.3■□□□□ 0.04
Col6a4A2AX52 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a4A2AX52 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col6a4A2AX52 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Gm10138-203ENSMUST00000206952 366 ntBASIC15.28■□□□□ 0.04
Col6a4A2AX52 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Gm18101-201ENSMUST00000215769 548 ntBASIC15.28■□□□□ 0.04
Col6a4A2AX52 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a4A2AX52 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.27■□□□□ 0.04
Col6a4A2AX52 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col6a4A2AX52 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a4A2AX52 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a4A2AX52 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a4A2AX52 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a4A2AX52 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col6a4A2AX52 Gm45058-201ENSMUST00000205810 766 ntBASIC15.27■□□□□ 0.04
Col6a4A2AX52 Gm18959-201ENSMUST00000208954 655 ntBASIC15.27■□□□□ 0.04
Col6a4A2AX52 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a4A2AX52 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Col6a4A2AX52 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a4A2AX52 AA414768-201ENSMUST00000121924 1257 ntBASIC15.27■□□□□ 0.03
Col6a4A2AX52 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a4A2AX52 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a4A2AX52 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a4A2AX52 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Gm17971-201ENSMUST00000190239 806 ntBASIC15.26■□□□□ 0.03
Col6a4A2AX52 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.26■□□□□ 0.03
Col6a4A2AX52 Gm12382-201ENSMUST00000122005 922 ntBASIC15.26■□□□□ 0.03
Col6a4A2AX52 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Col6a4A2AX52 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.25■□□□□ 0.03
Col6a4A2AX52 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.25■□□□□ 0.03
Col6a4A2AX52 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col6a4A2AX52 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms