Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.68□□□□□ -0.86
Ubr4A2AN08 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ubr4A2AN08 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Gm4535-201ENSMUST00000182274 558 ntBASIC9.67□□□□□ -0.86
Ubr4A2AN08 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Gm13474-201ENSMUST00000122466 815 ntBASIC9.67□□□□□ -0.86
Ubr4A2AN08 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC9.67□□□□□ -0.86
Ubr4A2AN08 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Spsb2-203ENSMUST00000112473 1322 ntBASIC9.67□□□□□ -0.86
Ubr4A2AN08 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Gm15920-201ENSMUST00000118998 402 ntBASIC9.67□□□□□ -0.86
Ubr4A2AN08 Gm10052-201ENSMUST00000168019 960 ntBASIC9.67□□□□□ -0.86
Ubr4A2AN08 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Gm7729-201ENSMUST00000050143 801 ntBASIC9.67□□□□□ -0.86
Ubr4A2AN08 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ubr4A2AN08 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Gm16061-201ENSMUST00000122167 857 ntBASIC9.66□□□□□ -0.86
Ubr4A2AN08 Mir1668-201ENSMUST00000184114 107 ntBASIC9.66□□□□□ -0.86
Ubr4A2AN08 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Gm3272-201ENSMUST00000181181 1229 ntBASIC9.66□□□□□ -0.86
Ubr4A2AN08 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Gm10566-201ENSMUST00000086739 996 ntBASIC9.66□□□□□ -0.86
Ubr4A2AN08 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ubr4A2AN08 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Rps4l-201ENSMUST00000071745 943 ntBASIC9.65□□□□□ -0.86
Ubr4A2AN08 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Gm26308-201ENSMUST00000157768 69 ntBASIC9.65□□□□□ -0.86
Ubr4A2AN08 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Ubr4A2AN08 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms