Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12-1A0N8R1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12-1A0N8R1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12-1A0N8R1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Trav12-1A0N8R1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12-1A0N8R1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12-1A0N8R1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-1A0N8R1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Gm13534-201ENSMUST00000121169 513 ntBASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-1A0N8R1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-1A0N8R1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Gm8969-201ENSMUST00000199694 526 ntBASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-1A0N8R1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Gm9988-201ENSMUST00000069786 435 ntBASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12-1A0N8R1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms