Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc112A0AUP1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc112A0AUP1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc112A0AUP1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Ccdc112A0AUP1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc112A0AUP1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ccdc112A0AUP1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc112A0AUP1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc112A0AUP1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc112A0AUP1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc112A0AUP1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc112A0AUP1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc112A0AUP1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc112A0AUP1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc112A0AUP1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc112A0AUP1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc112A0AUP1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc112A0AUP1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc112A0AUP1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc112A0AUP1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc112A0AUP1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc112A0AUP1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc112A0AUP1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.77■□□□□ 0.91
Ccdc112A0AUP1 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.77■□□□□ 0.91
Ccdc112A0AUP1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.77■□□□□ 0.91
Ccdc112A0AUP1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc112A0AUP1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccdc112A0AUP1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc112A0AUP1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc112A0AUP1 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.74■□□□□ 0.91
Ccdc112A0AUP1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc112A0AUP1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc112A0AUP1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc112A0AUP1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Ccdc112A0AUP1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc112A0AUP1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc112A0AUP1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc112A0AUP1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc112A0AUP1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc112A0AUP1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc112A0AUP1 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.72■□□□□ 0.91
Ccdc112A0AUP1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc112A0AUP1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc112A0AUP1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc112A0AUP1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc112A0AUP1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc112A0AUP1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc112A0AUP1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc112A0AUP1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc112A0AUP1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc112A0AUP1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms