Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 Gm21814-202ENSMUST00000203277 873 ntBASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3854A0A1B0GSS6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Gm3854A0A1B0GSS6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Gm12382-201ENSMUST00000122005 922 ntBASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.22■□□□□ 0.51
Gm3854A0A1B0GSS6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm3854A0A1B0GSS6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Gm3854A0A1B0GSS6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Gm3854A0A1B0GSS6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.2■□□□□ 0.5
Gm3854A0A1B0GSS6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gm3854A0A1B0GSS6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3854A0A1B0GSS6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3854A0A1B0GSS6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Gm3854A0A1B0GSS6 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.18■□□□□ 0.5
Gm3854A0A1B0GSS6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3854A0A1B0GSS6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3854A0A1B0GSS6 Mir6349-201ENSMUST00000184059 97 ntBASIC18.18■□□□□ 0.5
Gm3854A0A1B0GSS6 Timm23-208ENSMUST00000226683 750 ntBASIC18.18■□□□□ 0.5
Gm3854A0A1B0GSS6 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.18■□□□□ 0.5
Gm3854A0A1B0GSS6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms