Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lnp1A0A1B0GSK3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lnp1A0A1B0GSK3 Fst-202ENSMUST00000223640 2612 ntBASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm27405-201ENSMUST00000184201 112 ntBASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lnp1A0A1B0GSK3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm6365-201ENSMUST00000054711 744 ntBASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lnp1A0A1B0GSK3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Grk6-206ENSMUST00000224995 2971 ntBASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Lnp1A0A1B0GSK3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Lnp1A0A1B0GSK3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lnp1A0A1B0GSK3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lnp1A0A1B0GSK3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lnp1A0A1B0GSK3 Gm7291-201ENSMUST00000199147 382 ntBASIC15.1■□□□□ 0.01
Lnp1A0A1B0GSK3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lnp1A0A1B0GSK3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.1■□□□□ 0.01
Lnp1A0A1B0GSK3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.1■□□□□ 0.01
Lnp1A0A1B0GSK3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lnp1A0A1B0GSK3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms