Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv17A0A140T8P8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv17A0A140T8P8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv17A0A140T8P8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv17A0A140T8P8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv17A0A140T8P8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv17A0A140T8P8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv17A0A140T8P8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trbv17A0A140T8P8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv17A0A140T8P8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.94□□□□□ -0.18
Trbv17A0A140T8P8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv17A0A140T8P8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv17A0A140T8P8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms