Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv13-2A0A140T8N6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-2A0A140T8N6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-2A0A140T8N6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-2A0A140T8N6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.65□□□□□ -0.39
Trbv13-2A0A140T8N6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv13-2A0A140T8N6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-2A0A140T8N6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-2A0A140T8N6 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.63□□□□□ -0.39
Trbv13-2A0A140T8N6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-2A0A140T8N6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-2A0A140T8N6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-2A0A140T8N6 Gm7290-201ENSMUST00000104990 617 ntBASIC12.63□□□□□ -0.39
Trbv13-2A0A140T8N6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 213.5 ms