Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Gm12251-201ENSMUST00000117893 792 ntBASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Smad6-203ENSMUST00000179458 273 ntBASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav19A0A0B4J1K4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav19A0A0B4J1K4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav19A0A0B4J1K4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav19A0A0B4J1K4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.58□□□□□ -0.23
Trav19A0A0B4J1K4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav19A0A0B4J1K4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav19A0A0B4J1K4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms