Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.51■□□□□ 0.55
Igkv16-104A0A0B4J1I1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.48■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Gm6659-201ENSMUST00000174752 547 ntBASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.47■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv16-104A0A0B4J1I1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv16-104A0A0B4J1I1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms