Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv19A0A0B4J1H4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Fst-202ENSMUST00000223640 2612 ntBASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Gm10493-201ENSMUST00000097270 612 ntBASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv19A0A0B4J1H4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv19A0A0B4J1H4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.59□□□□□ -0.07
Trbv19A0A0B4J1H4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trbv19A0A0B4J1H4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv19A0A0B4J1H4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv19A0A0B4J1H4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Trbv19A0A0B4J1H4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv19A0A0B4J1H4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms