Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Spcs1-204ENSMUST00000226782 949 ntBASIC14.4□□□□□ -0.1
Trbv12-2A0A0B4J1H1 Golgb1-201ENSMUST00000023534 498 ntBASIC14.4□□□□□ -0.1
Trbv12-2A0A0B4J1H1 Gm9959-201ENSMUST00000068277 390 ntBASIC14.4□□□□□ -0.1
Trbv12-2A0A0B4J1H1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trbv12-2A0A0B4J1H1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-2A0A0B4J1H1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-2A0A0B4J1H1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-2A0A0B4J1H1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-2A0A0B4J1H1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-2A0A0B4J1H1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trbv12-2A0A0B4J1H1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-2A0A0B4J1H1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Tgds-204ENSMUST00000228543 1594 ntBASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-2A0A0B4J1H1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms