Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv15A0A0A6YYE3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Smad6-203ENSMUST00000179458 273 ntBASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv15A0A0A6YYE3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.08■□□□□ 0.01
Trbv15A0A0A6YYE3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv15A0A0A6YYE3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv15A0A0A6YYE3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Gm43137-201ENSMUST00000198052 594 ntBASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv15A0A0A6YYE3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv15A0A0A6YYE3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms