Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv3A0A0A6YYE2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv3A0A0A6YYE2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv3A0A0A6YYE2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv3A0A0A6YYE2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv3A0A0A6YYE2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Trbv3A0A0A6YYE2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv3A0A0A6YYE2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv3A0A0A6YYE2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv3A0A0A6YYE2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv3A0A0A6YYE2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv3A0A0A6YYE2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv3A0A0A6YYE2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv3A0A0A6YYE2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv3A0A0A6YYE2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Trbv3A0A0A6YYE2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv3A0A0A6YYE2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv3A0A0A6YYE2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv3A0A0A6YYE2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms