Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gm12441-201ENSMUST00000121806 588 ntBASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Nespas-201ENSMUST00000143738 1083 ntBASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Sirpb1bA0A0A6YXN8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms