Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav13-4-dv7A0A075B6C2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.52□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms