Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-5A0A075B6B9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Trav6d-5A0A075B6B9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Trav6d-5A0A075B6B9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Trav6d-5A0A075B6B9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6d-5A0A075B6B9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6d-5A0A075B6B9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Trav6d-5A0A075B6B9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm11421-201ENSMUST00000122124 294 ntBASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-5A0A075B6B9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-5A0A075B6B9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms