Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-4A0A075B6B4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-4A0A075B6B4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-4A0A075B6B4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-4A0A075B6B4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-4A0A075B6B4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-4A0A075B6B4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-4A0A075B6B4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.02□□□□□ -0.16
Trav6-4A0A075B6B4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-4A0A075B6B4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-4A0A075B6B4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Gm9194-201ENSMUST00000220749 1447 ntBASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Gm9954-202ENSMUST00000198686 4725 ntBASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Gm22325-201ENSMUST00000158904 308 ntBASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Gm3807-201ENSMUST00000193520 1168 ntBASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 AC107452.1-201ENSMUST00000227963 481 ntBASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav6-4A0A075B6B4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms